Discounts can be applied to an order, but unfortunately, it is not possible to apply a scholarship to an order at this point. Until we can get that added, here is a work around for the issue so it will apply to the scholarship fund. To do this, you will already need to have the scholarship fund created.
From the Order, disconnect the registration as seen below.
Apply a Scholarship.
From the ORDERS DASHBOARD MODULE, search for the original order number.
From the Order Page, you can Add Registration to connect a registration to that order.
The Scholarship is now applied!